BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB017F04SP1|AL427186
(1006 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1044 1842 0.0
>3x_Contig1044
Length = 4552
Score = 1842 bits (921), Expect = 0.0
Identities = 980/1005 (97%), Gaps = 4/1005 (0%)
Strand = Plus / Minus
Query: 4 ggchtgctaatgaaagtgataacttcagtcctgataggggcaaacaaaacagaaatgtca 63
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2777 ggcttgctaatgaaagtgataacttcagtcctgataggggcaaacaaaacagaaatgtca 2718
Query: 64 atgaaataccgaaaaaccctggtaagtacgaaaaattgaacctgaggctaaatgaaactg 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2717 atgaaataccgaaaaaccctggtaagtacgaaaaattgaacctgaggctaaatgaaactg 2658
Query: 124 acggtactgaaagcgctaaatactacgatgaagtattttcagaagctgaatggaagcaag 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2657 acggtactgaaagcgctaaatactacgatgaagtattttcagaagctgaatggaagcaag 2598
Query: 184 agtgcatcgatttggcaacatatgatatatcgcaatggatacttaaaggtcaagatatat 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2597 agtgcatcgatttggcaacatatgatatatcgcaatggatacttaaaggtcaagatatat 2538
Query: 244 tgarggaacagcatgcactcatgtgtaggatggtacmagcmagaataaagttatcacatc 303
||| |||||||||||||||||||||||||||||||| ||| |||||||||||||||||||
Sbjct: 2537 tgaaggaacagcatgcactcatgtgtaggatggtacaagcaagaataaagttatcacatc 2478
Query: 304 gttttcaagttatatcagacatcatcaatgaacgggcggaactcttaatccagcagggcg 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2477 gttttcaagttatatcagacatcatcaatgaacgggcggaactcttaatccagcagggcg 2418
Query: 364 agattttagatgcaaaactcaccaaagtacaggatcttgggaaggaaatcctggatttat 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2417 agattttagatgcaaaactcaccaaagtacaggatcttgggaaggaaatcctggatttat 2358
Query: 424 tgtagaaatatatatntgtncttgtcagcggcagtataacaagggaagaataaactgtcg 483
|||||| |||||||| ||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 2357 tgtagagatatatatatgtacttgtcagcggcagtataacaagggaagaataaactgtcg 2298
Query: 484 cttggacaaaggcttaacatatgtttatgttatatttvcggrtcttctattaatgargtt 543
||||||||||||||||||||||||||||||||||||| ||| |||||||||||||| |||
Sbjct: 2297 cttggacaaaggcttaacatatgtttatgttatatttacggatcttctattaatgaagtt 2238
Query: 544 tatggggaaaattagtattagcttctcatacagctccgactaanatgacggatttacaac 603
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 2237 tatggggaaaattagtattagcttctcatacagctccgactaaaatgacggatttacaac 2178
Query: 604 aatgatcgavtaccgatgattaabgatttacacmagcmactgtagaatcatatacaasag 663
||||||||| ||||||||||||| |||||| || ||| ||||||||||||||||||| ||
Sbjct: 2177 aatgatcgaataccgatgattaaagatttaaacaagcaactgtagaatcatatacaaaag 2118
Query: 664 aaataaaaaggatggtacatctttttattattaactaaagttttctagatgataattgct 723
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2117 aaataaaaaggatggtacatctttttattattaactaaagttttctagatgataattgct 2058
Query: 724 tagtttctttttctgaatcttctgtctctaacagcagaaacagaggaaacggataatggc 783
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2057 tagtttctttttctgaatcttctgtctctaacagcagaaacagaggaaacggataatggc 1998
Query: 784 aacttcaaacccaaagagttgaccaattcagcggtttgagtgtc-acgttcaagacgtcg 842
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 1997 aacttcaaacccaaagagttgaccaattcagcggtttgagtgtcaacgttcaagacgtcg 1938
Query: 843 ttagagtgagacaagtccaaagcagagacatctggracgtattgatcctttctttctctt 902
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 1937 ttagagtgagacaagtccaaagcagagacatctggaacgtattgatcctttctttctctt 1878
Query: 903 tcttcttcttgcaacttgaaggaaatacctctaactgggaccttttggattctcttcatc 962
|||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 1877 tcttcttcttgcaacttgaaggaaatacctctaactggacccttttggattctcttcatc 1818
Query: 963 aaatgggtggtgta--cagcaatcttgtttytc-atctcttagat 1004
|||||||||||||| |||||||||||||| || |||||||||||
Sbjct: 1817 aaatgggtggtgtaaccagcaatcttgtttctcaatctcttagat 1773
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.39 0.712 1.32
Gapped
Lambda K H
1.39 0.712 1.32
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 8183
Number of Sequences: 1807
Number of extensions: 8183
Number of successful extensions: 59
Number of sequences better than 1.0e-20: 1
length of query: 1006
length of database: 10,358,551
effective HSP length: 16
effective length of query: 990
effective length of database: 10,329,639
effective search space: 10226342610
effective search space used: 10226342610
T: 0
A: 40
X1: 5 (10.0 bits)
X2: 14 (28.0 bits)
S1: 12 (24.5 bits)
S2: 50 (100.5 bits)